Hvidsten research group
Tools developed as part of our research
Maintained by us or some of our collaborators
Click the icon to go to the tool/code!
Transkingdom network analysis - integrating host-microbiota omics data
ComPlEx - R code for Comparative analysis of Plant co-Expression
DiCE - R code for Differential Co-Expression network analysis
PlantGenIE - Plant Genome Integrated Explorer - Tools for genomics research, including co-expression network analysis (Street Lab)
SalMotifDB - Salmonid Motif DataBase
EVE - R code for the Expression Variance and Evolution model (Sandve Lab)
Rosetta - Rough Set Toolkitt for Analysis of data (source code) (Komorowski lab)
Older stuff that has been decommissioned
Synergy - Tools for exploring the gene regulation in the cyanobacterium Synechocystis
FragHMMent - Residue-residue contact prediction
AspWood/NorWood - High-spatial-resolution transcriptomics profiles in Aspen and Norway spruce Wood formation - Data in PlantGenIE!